Journals: 
[1] Shouping Zhu, Di Dong, Udo Jochen Birk, Matthias Rieckher, Nektarios Tavernarakis, Xiaochao Qu, Jimin Liang, Jie Tian, and Jorge Ripoll*. Automated Motion Correction for in-vivo Optical Projection Tomography. IEEE Transactions on Medical Imaging, Vol.31, No.7, pp.1358-1371. 2012  [PDF]

[2] Xiuli Li, Xinjian Chen, Jianhua Yao, Xing Zhang, Fei Yang, and Jian Tian*. Automatic renal cortex segmentation using implicit shape registration and novel multiple surfaces graph search. IEEE Transactions on Medical Imaging, Vol. 31, No. 10, pp.1849-1860, 2012. [PDF]

[3] Qingqi Hong, Qingde Li*, Jie Tian. Implicit reconstruction of vasculatures using bivariate piecewise algebraic splines. IEEE Transactions on Medical Imaging, Vol.31, No.3, pp.543-553. 2012. [PDF]

[4] Fei Yang, Qingde Li, Dehui Xiang, Yong Cao and Jie Tian, A Versatile Optical Model for Hybrid Rendering of Volume Data, IEEE Transactions on Visualization and Computer Graphics, Vol. 18, No. 6, pp. 925-937, 2012.[PDF]

[5] Chenghu Qin**， Jianghong Zhong**，Zhenhua Hu, Xin Yang, Jie Tian*. Recent Advances in Cerenkov Luminescence and Tomography Imaging. IEEE Journal of Selected Topics in Quantum Electronics, Vol. 18, No. 3, pp.1084-1093, 2012.

[6] Di Dong, Shouping Zhu, Chenghu Qin, Varsha Kumar, Jens V. Stein, Stephan Oehler, Charalambos Savakis, Jie Tian and Jorge Ripoll*. Automated Recovery of the Center of Rotation in Optical Projection Tomography in the Presence of Scattering. IEEE Transactions on Information Technology in Biomedicine, DOI: 10.1109/TITB.2012.2219588.[PDF]

[7] Yuhua Gu, Virendra Kumar, Lawrence O Hall, Dmitry B Goldgof, Ching-Yen Li, René Korn, Claus Bendtsen, Emmanuel Rios Velazquez, Andre Dekker, Hugo Aerts, Philippe Lambin, Xiuli Li, Jie Tian, Robert A Gatenby, Robert J Gillies, “Automated Delineation of Lung Tumors from CT Images Using a Single Click Ensemble Segmentation Approach,” Pattern Recognition, DOI :http://dx.doi.org/10.1016/j.patcog.2012.10.005.[PDF]

[8] Wei Guo, Kebin Jia*, Qian Zhang, Xueyan Liu, Jinchao Feng, Chenghu Qin, Xibo Ma, Xin Yang, and Jie Tian*. Sparse Reconstruction for Bioluminescence Tomography Based on the Semigreedy Method. Computational and Mathematical Methods in Medicine Volume 2012 (2012), Article ID 494808, 10 pagesdoi:10.1155/2012/494808

[9] Wei Guo, Kebin Jia*, Dong Han, Qian Zhang, Xueyan Liu, Jinchao Feng, Chenghu Qin, Xibo Ma, and Jie Tian*. Efficient sparse reconstruction algorithm for bioluminescence tomography based on duality and variable splitting. Applied Optics Vol. 51, Iss. 23, pp. 5676–5685. 2012

[10] Kai Cao, Xin Yang, Xinjian Chen, Xunqiang Tao, Yali Zang, Jimin Liang, Jie Tian*. A Novel Global Feature for Minutiae-based Fingerprint Matching. Pattern Recognition Letters. DOI: 10.1016/j.patrec.2012.03.007.

[11] Yuanyuan Feng, Lijun Bai, Yanshuang Ren, Shangjie Chen, Hu Wang, Wensheng Zhang*, Jie Tian*. FMRI connectivity analysis of acupuncture effects on the whole brain network in mild cognitive impairment patients. Magnetic Resonance Imaging (2012), Vol. 30,No. 5,pp.672-682, 2012.

[12] Chongguang Zhong, Lijun Bai, Ruwei Dai, Ting Xue, Hu Wang, Yuanyuan Feng, Zhenyu Liu, Youbo You, Shangjie Chen, Jie Tian*. Modulatory effects of acupuncture on resting-state networks: an fMRI study combining ICA and multivariate Granger causality analysis. Journal of Magnetic Resonance Imaging, Vol. 35, No. 3, pp. 572-581, 2012.. 

[13] Jianghong Zhong, Chenghu Qin, Xin Yang, Zhe Chen, Xiang Yang, and Jie Tian*. Fast Specific Tomography Imaging via Cerenkov Emission. Molecular Imaging and Biology, Vol. 14, No. 3, pp. 286-292, 2012. 

[14] Yi Zhang, Jie Tian*, Karen M. von Deneen, Yijun Liu*, Mark S. Gold. Process, Addictions in 2012: Food, Sex, Internet, and Gambling. Neuropsychiatry Journal, April. 2012.

[15] Dahua Yu, Kai Yuan, Ling Zhao, Limei Zhao, Minghao Dong, Peng Liu, Guihong Wang, Jixin Liu, Jinbo Sun, Guangyu Zhou, Karen M. von Deneen, Wei Qin*, Jie Tian*. Regional homogeneity abnormalities in patients with interictal migraine without aura: a resting-state study, NMR in biomedicine, 2012, 25(5):806-12.

[16] Guanyu Zhou, Peng Liu, Jiaquan He, Minghao Dong, Xuejuan Yang, Bingwen Hou, Karen M.von Deneena, Wei Qian*, Jie Tian*, Inter-individual reaction time variability is related to resting-state network topology: An EEG study, Neuroscience, 2012 (202), 276-282. 　 

[17] Qiang Li, Yarong Wang, Yi Zhang, Wei Li, Weichuan Yang, Jia Zhu, Ning Wu, Haifeng Chang, Ying Zheng, Wei Qin, Liyan Zhao, Kai Yuan, Jixin Liu, Wei Wang*, Jie Tian*, Craving correlates with mesolimbic responses to heroin-related cues in short-term abstinence from heroin: An event-related fMRI study, Brain Research, 2012, in press.

[18] Xuejuan Yang, Peng Liu, Jinbo Sun, Guihong Wang, Fang Zeng, Kai Yuan, Jixin Liu, Minghao Dong, Karen M. von Deneen, Wei Qin*, Jie Tian* ,Impact of Brain-Derived Neurotrophic Factor Val66Met Polymorphism on Cortical Thickness and Voxel-Based Morphometry in Healthy Chinese Young Adults, PloS ONE, 2012, 7(6): e37777.

[19] Chenwang Jin, Kai Yuan, Limei Zhao, Ling Zhao, Dahua Yu, Karen M. von Deneen, Ming Zhang, Wei Qin*, Weixin Sun*, Jie Tian*, Structural and functional abnormalities in migraine patients without aura, NMR in Biomedicine, 2012 Jun 7. doi: 10.1002/nbm.2819. 

[20] Fang Zeng, Wei Qin, Tingting Ma, Jinbo Sun, Yong Tang, Kai Yuan, Ying Li, Jixin Liu, Xuguang Liu, Wenzhong Song, Lei Lan, Mailan Liu, Shuguang Yu, Xin Gao, Jie Tian and Fanrong Liang, Influence of Acupuncture Treatment on Cerebral Activity in Functional Dyspepsia Patients and Its Relationship With Efficacy. Am J Gastroenterol. 2012 May 29. doi: 10.1038/ajg.2012.53. 

[21] Minghao Dong, Wei Qin, Jinbo Sun, Peng Liu, Kai Yuan, Jixin Liu, Guangyu Zhou, Karen M. von Deneen, Jie Tian*, Tempo-spatial analysis of vision-related acupoint specificity in the occipital lobe using fMRI: An ICA study, Brain Research, 2012, 1436:34-42.

[22] Kai Yuan, Wei Qin*, Peng Liu, Ling Zhao, Dahua Yu, Limei Zhao, Minghao Dong, Jixin Liu, Xuejuan Yang, Karen M. von Deneen, Fanrong Liang, Jie Tian*, Reduced fractional anisotropy of corpus callosum modulates inter-hemispheric resting state functional connectivity in migraine patients without aura. PLoS One. 2012. DOI: 10.1371/journal.pone.0045476. 

[23] Guangyu Zhou, Peng Liu, Fang Zeng, Kai Yuan, Dahua Yu, Karen M. Von Deneen, Fanrong Liang, Wei Qin*, and Jie Tian*, Increased Interhemispheric Resting-state Functional Connectivity in Functional Dyspepsia: A Pilot Study， NMR in Biomedicine. 2012.

[24] Jinbo Sun, Wei Qin, Lingmin Jin, Minghao Dong, Xuejuan Yang, Yuanqiang Zhu,Yang Yang, Karen M. von Deneen, Qiyong Gong, Jie Tian*, Impact of global normalization in fMRI acupuncture studies.Evidence-Based Complementary and Alternative Medicine, Sep. 2012. (In press) 

[25] Liyan Zhao*, Jie Tian, Wei Wang, Wei Qin, Jie Shi, Qiang Li, Kai Yuan, Minghao Dong, Weichuang Yang, Yarong Wang, Li-Li Sun, Lin Lu. The Role of Dorsal Anterior Cingulate Cortex in the Regulation of Craving by Reappraisal in Smokers. PLoS ONE 7(8): e43598. doi:10.1371/journal.pone.0043598. 

[26] Jixin Liu, Ling Zhao, Guoying Li, Shiwei Xiong, Jiaofen Nan, Jing Li, Kai Yuan, Karen M. von Deneen, Fanrong Liang, Wei Qin*, Jie Tian: Hierarchical alteration of brain structural and functional networks in female migraine sufferers. PLoS One in press. 

[27] Kai Yuan, Ping Cheng, Tao Dong, Yanzhi Bi, Lihong Xing, Dahua Yu, Limei Zhao, Minghao Dong, Karen M. von Deneen, Yijun Liu, Wei Qin*, Jie Tian*. Cortical thickness abnormalities in late adolescence with online gaming addiction. PLoS One. 2012. DOI: 10.1371/journal.pone.0053055. 

[28] Dahua Yu, Kai Yuan, Wei Qin*, Ling Zhao, Minghao Dong, Peng Liu, Xuejuan Yang, Jixin Liu, Jinbo Sun, Guangyu Zhou, Karen M von Deneen and Jie Tian, Axonal loss of white matter in migraine without aura: A tract-based spatial statistics study, Cephalalgia , 2012, DOI: 9.1177/0333102412466964, in press.

[29] Guangyu Zhou, Wei Qin*, Fang Zeng, Peng Liu, Xuejuan Yang, Karen M. von Deneen, Qiyong Gong, Fanrong Liang, and Jie Tian. White Matter Microstructural Changes in Functional Dyspepsia: A Diffusion Tensor Imaging Study. American Journal of Gastroenterology, 2012, in press.

[30] Ting Xue, Kai Yuan, Ping Cheng, Ling Zhao, Limei Zhao, Dahua Yu, Tao Dong, Karen M. von Deneen, Qiyong Gong, Wei Qin*, Jie Tian*. Alterations of regional spontaneous neuronal activity and the corresponding brain circuits’ changes during the resting state in migraine without aura. NMR in biomedicine, in press.

[31] Ting Xue, Kai Yuan, Ling Zhao, Ping Cheng, Dahua Yu, Limei Zhao,Tao Dong, Karen M. von Deneen, Wei Qin*, Jie Tian*. Intrinsic Brain Network Abnormalities in Migraines without Aura Revealed in Resting-State fMRI. PLoS One, in press.

[32] Yi Zhang, Heng Zhao, Siyou Qiu, Jie Tian*, Xiaotong Wen, Jennifer L. Miller, Karen M. von Deneen, Zhenyu Zhou, Mark S. Gold, Yijun Liu*. Altered functional brain networks in Prader-Willi syndrome. NMR in Biomedicine, 2012, in press.

[33] Jinbo Sun, Yuanqiang Zhu, Lingmin Jin, Yang Yang, Karen M. Von Deneen, Wei Qin*, Qiyong Gong，Jie Tian*. Partly separated activations in the spatial distribution between de-qi and sharp pain during acupuncture stimulation: an fMRI-based study. Evidence-Based Complementary and Alternative Medicine, 2012, in press.

[34] Huangjian Yi, Duofang Chen, Xiaochao Qu, Kuan Peng, Xueli Chen, Yuanyuan Zhou, Jie Tian, Jimin Liang*, Multilevel, hybrid regularization method for reconstruction for fluorescence molecular tomography, Applied Optics, 2012,51(7):975-986.

[35] Xueli Chen, Jimin Liang*, Xiaochao Qu, Yanbin Hou, Shouping Zhu, Duofang Chen, Xinbo Gao, and Jie Tian*, Mapping of bioluminescent images onto CT volume surface for dual-modality BLT and CT imaging, Journal of X-ray Sciences and Technology, 2012, 20:31-44.

[36] Qitan Zhang, Xiaochao Qu, Duofang Chen, Xueli Chen, Jimin Liang*, and Jie Tian*, Experimental three-dimensional bioluminescence tomography reconstruction using the lp regularization, Advanced Science Letters, 2012, 16(1):125-129.

[37] Xueli Chen+, Defu Yang+, Xiaochao Qu, Hao Hu, Jimin Liang*, Xinbo Gao, and Jie Tian*, Comparisons of hybrid radiosity-diffusion model and diffusion equation for bioluminescence tomography in cavity cancer detection, Journal of Biomedical Optics, 2012, 17(6): 066015.

[38] Zhenhua Hu+, Xiaowei Ma+, Xiaochao Qu, Weidong Yang, Jimin Liang, Jing Wang*, and Jie Tian*, Three-dimensional Noninvasive Monitoring Iodine-131 Uptake in the Thyroid Using a Modified Cerenkov Luminescence Tomography, PLoS ONE, 2012, 7(5):e37623.

[39] Zhenhua Hu, Xueli Chen, Jimin Liang*, Xiaochao Qu, Duofang Chen, Weidong Yang, Jing Wang, Feng Cao, and Jie Tian*, Single photon emission computed tomography-guided Cerenkov luminescence tomography, Journal of Applied Physics, 2012, 112:024703.

[40] Zhenhua Hu+, Weidong Yang+, Xiaowei Ma, Wenhui Ma, Xiaochao Qu, Jimin Liang*, Jing Wang*, and Jie Tian*, Cerenkov luminescence tomography of aminopeptidase N (APN/CD13) expression in mice bearing HT1080 tumors, Molecular Imaging, 2012, in press.

[41] HuangJian Yi, Duofang Chen, Wei Li, Shuang Zhou, Miao Ning, Shouping Zhu, Jie Tian and Jimin Liang*, Normalized Born Approximation Based Two-Stage Reconstruction Algorithm for Quantitative Fluorescence Molecular Tomography, Journal of Electrical and Computer Engineering, 2012, Article ID 838967, 9 pages.

[42] Qitan Zhang+, Xueli Chen+, Xiaochao Qu, Jimin Liang*, and Jie Tian*, Comparative studies of lp-regularization-based reconstruction algorithms for bioluminescencetomography, Biomedical Optics Express, 2012, 3(11), 2916-2936. 

[43] Jing Xin, Yonghua Zhan, Limin Xia, Hongwu Zhu, Yongzhan Nie, Jimin Liang*, and Jie Tian*, ApoG2 as the most potent gossypol derivatives inhibits cell growth and induces apoptosis on gastric cancer cells, Biomedicine & Pharmacotherapy, 2012 on line.

[44] Minghao Dong+, Wei Qin+, Ling Zhao, Xue Juan Yang, Kai Yuan, Fang Zeng, Jinbo Sun, Dahua Yu, K.M. von Deneen, Fanrong Liang, Jie Tian* (2012): Expertise modulates local regional homogeneity of spontaneous brain activity in the resting brain: an fMRI study using the model of skilled acupuncturists. Hum Brain Mapp, in press.

[45] Xibo Ma, Qian Zhang, Xin Yang, and Jie Tian*, Development of new technologies for stem cell research, Journal of Biomedicine and Biotechnology,2012,Article ID741416, 7 pages, doi:10.1155/2012/741416, 2012 (SCI index, IF=2.436).

[46] Chenghu Qin+, Jinchao Feng+, Shouping Zhu+, Xibo Ma+(并列第一作者), Jianghong Zhong, Ping Wu, Zhengyu Jin, and Jie Tian*, Recent advances in bioluminescence tomography: methodology and system as well as application Laser and Photonics Reviews, 1-21(2012) DOI 10.1002/LPOR.201280011 (SCI index, IF=7.388)

[47] Zhenwen Xue, Chenghu Qin, Qian Zhang, Xibo Ma, Xin Yang and Jie Tian*. Fast and robust three-dimensional fluorescence source reconstruction based on separable approximation and adaptive regularization. Optics Communications, Vol. 285, No. 24, pp. 5570-5578, 2012. (SCI Index)

[48]Feng J, Qin C, Jia K, et al. Bioluminescence tomography imaging in vivo: recent advances[J]. IEEE Journal of Selected Topics in Quantum Electronics, 2012, 18(4): 1394-1402.

[49]Zou A M, Kumar K D, Hou Z G. Attitude coordination control for a group of spacecraft without velocity measurements[J]. IEEE Transactions on Control Systems Technology, 2012, 20(5): 1160-1174.

Conference proceedings: 

[1] Ping Wu, Kai Liu, Zhenwen Xue, Wei Guo, Chenghu Qin, Jie Tian*. Tomographic bioluminescence imaging by an iteratively re-weighted minimization, Proceedings of SPIE Symposium on Medical Imaging 2012, San Diego, USA, February 4-9, 2012. (Oral)

[2] Zhenwen Xue, Chenghu Qin, Ping Wu, Xin Yang, Jie Tian*. Fast Implementation for Fluorescence Tomography Based on Coordinate Descent with Limited Measurements.  Proceedings of SPIE Symposium on Medical Imaging 2012, San Diego, California, USA, February 4-9, 2012.  (Oral)

[3] Wei Guo, Kebin Jia, Jie Tian, Dong Han, Xueyan Liu, Kai Liu, Qian Zhang,Jinchao Feng and Chenghu Qin. Sparsity reconstruction for bioluminescence tomography based on an augmented lagrangian method. SPIE Photonics West, San Francisco, California, USA, January 21-26, 2012. (Oral)

[4] Chongguang Zhong, Lijun Bai, Fangyuan Cui, Ruwei Dai, Ting Xue, Hu Wang, Yuanyuan Feng,Zhenyu Liu, Youbo You, Jie Tian. Tractography of white matter based on diffusion tensor imaging in ischemic stroke involving the corticospinal tract: a preliminary study. Proceedings of SPIE Symposium on Medical Imaging 2012, San Diego, California, USA, February 4-9, 2012.  (Oral)

[5] Youbo You, Lijun Bai, Ruwei Dai, Ting Xue, Chongguang Zhong, Zhenyu Liu, Hu Wang, Yuanyuan Feng, Wenjuan Wei, Jie Tian*. Differential spectral power alteration following acupuncture at different designated places revealed by magnetoencephalography, Proceedings of SPIE Symposium on Medical Imaging 2012, San Diego, California, USA, February 4-9, 2012. (Oral)

[6] Lu Feng, Jiangang Liu, David Huber, Cory Rieth, Ling Li, Jie Tian*, Kang Lee. The neural correlates of illusory face perception: An fMRI study. Annual Meeting of Vision Sciences Society (VSS) 2012, Naples, Florida, USA, May 11-16, 2012. [Abstract] (Poster)

[7] Jiangang Liu, Lu Feng. Ling Li, Jie Tian*, Kang Lee. The neural correlates of own- and other-race face recognition and categorization: An fMRI study. Annual Meeting of Vision Sciences Society (VSS) 2012, Naples, Florida, USA, May 11-16, 2012. [Abstract] (Poster)
[8] Ling Li , Jiangang Liu , Lu Feng , Kang Lee , Jie Tian*. Intrinsic word processing neural networks in children and adults during the resting state. OHBM 2012, Beijing, China, June 10-14, 2012. [Abstract] (Poster)